DRUG BINDING INTERFACES MAPPED TO 'Rhodobacter sphaeroides'

List of Binding Interfaces
(Click on the entry ID to view details of interfaces and pattern clusters)
(Note that ASSAM search use only 3-12 residue containing patterns)
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DrReposER ID PDB Ligand Organism Macromolecule Pfam Res. Interface HETATM
1NW5_A_SAMA401 1nw5 SAM

DB00118
(S-
Adenosylmethionine)
Rhodobacter
sphaeroides
MODIFICATION
METHYLASE RSRI
PF01555
(N6_N4_Mtase)
15 ASP A  46
CYS A  47
ASP A  65
PRO A  67
TRP A  84
HIS A 223
THR A 225
LYS A 227
PHE A 250
GLY A 252
SER A 253
VAL A 255
ASP A 271
ALA A 272
ALA A 273
SAM A 401
3DTU_A_CUA1023 3dtu CU

DB09130
(Copper)
Rhodobacter
sphaeroides
CYTOCHROME C OXIDASE
SUBUNIT 1
PF00115
(COX1)
3 HIS A 284
HIS A 333
HIS A 334
 CU A1023
3DTU_B_CUB1004 3dtu CU

DB09130
(Copper)
Rhodobacter
sphaeroides
CYTOCHROME C OXIDASE
SUBUNIT 2
PF00116
(COX2_TM)
PF02790
(COX2)
4 HIS B 217
CYS B 252
CYS B 256
MET B 263
 CU B1004
3DTU_B_CUB1022 3dtu CU

DB09130
(Copper)
Rhodobacter
sphaeroides
CYTOCHROME C OXIDASE
SUBUNIT 2
PF00116
(COX2_TM)
PF02790
(COX2)
3 CYS B 252
CYS B 256
HIS B 260
 CU B1022
3DTU_C_CUC569 3dtu CU

DB09130
(Copper)
Rhodobacter
sphaeroides
CYTOCHROME C OXIDASE
SUBUNIT 1
None 3 HIS C 284
HIS C 333
HIS C 334
 CU C 569
3DTU_C_DXCC576 3dtu DXC

DB03619
(Deoxycholic
Acid)
Rhodobacter
sphaeroides
CYTOCHROME C OXIDASE
SUBUNIT 1;
CYTOCHROME C OXIDASE
SUBUNIT 2
None 8 HIS D  96
GLU D 101
THR D 105
PRO C 315
ALA C 319
ALA C 322
PRO C 358
ILE C 361
DXC C 576
3DTU_D_CUD3 3dtu CU

DB09130
(Copper)
Rhodobacter
sphaeroides
CYTOCHROME C OXIDASE
SUBUNIT 2
None 3 CYS D 252
CYS D 256
HIS D 260
 CU D   3
3DTU_D_CUD4 3dtu CU

DB09130
(Copper)
Rhodobacter
sphaeroides
CYTOCHROME C OXIDASE
SUBUNIT 2
None 4 HIS D 217
CYS D 252
CYS D 256
MET D 263
 CU D   4
3IV6_A_SAMA301 3iv6 SAM

DB00118
(S-
Adenosylmethionine)
Rhodobacter
sphaeroides
PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE
None 15 ASN A   5
TRP A  11
PHE A  18
PRO A  28
GLY A  50
SER A  52
THR A  53
ASP A  71
PHE A  72
SER A  73
ASP A  95
ILE A  96
THR A  97
ASP A 114
LEU A 116
SAM A 301
3IV6_B_SAMB301 3iv6 SAM

DB00118
(S-
Adenosylmethionine)
Rhodobacter
sphaeroides
PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE
None 12 TRP B  11
PHE B  18
GLY B  50
SER B  52
THR B  53
ASP B  71
PHE B  72
ASP B  95
ILE B  96
ASP B 114
LEU B 116
ARG B 119
SAM B 301
3IV6_C_SAMC301 3iv6 SAM

DB00118
(S-
Adenosylmethionine)
Rhodobacter
sphaeroides
PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE
None 15 TRP C  11
PHE C  18
ARG C  27
PRO C  28
GLY C  50
SER C  52
THR C  53
ASP C  71
PHE C  72
SER C  73
ASP C  95
ILE C  96
ASP C 114
ARG C 115
LEU C 116
SAM C 301
3IV6_D_SAMD301 3iv6 SAM

DB00118
(S-
Adenosylmethionine)
Rhodobacter
sphaeroides
PUTATIVE
ZN-DEPENDENT ALCOHOL
DEHYDROGENASE
None 14 TRP D  11
PHE D  18
GLY D  50
SER D  52
THR D  53
ASP D  71
PHE D  72
SER D  73
ASP D  95
ILE D  96
ASP D 114
ARG D 115
LEU D 116
ARG D 119
SAM D 301
5KKZ_A_ASCA1004 5kkz ASC

DB00126
(Vitamin
C)
Rhodobacter
sphaeroides
CYTOCHROME B;
UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
None
PF00032
(Cytochrom_B_C)
PF00033
(Cytochrome_B)
6 HIS G 152
HIS A 291
VAL A 293
TYR A 302
ARG A 306
GLN A 384
ASC A1004
5KKZ_E_ASCE1004 5kkz ASC

DB00126
(Vitamin
C)
Rhodobacter
sphaeroides
CYTOCHROME B;
UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
None
PF00355
(UCR_Fe-S_N)
PF10399
(Rieske)
7 HIS C 152
HIS E 291
ILE E 292
VAL E 293
TYR E 302
ARG E 306
GLN E 384
ASC E1004
5KKZ_K_ASCK1004 5kkz ASC

DB00126
(Vitamin
C)
Rhodobacter
sphaeroides
CYTOCHROME B;
UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
None 7 HIS Q 152
HIS K 291
ILE K 292
VAL K 293
TYR K 302
ARG K 306
GLN K 384
ASC K1004
5KKZ_O_ASCO1004 5kkz ASC

DB00126
(Vitamin
C)
Rhodobacter
sphaeroides
CYTOCHROME B;
UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
None 7 HIS M 152
HIS O 291
ILE O 292
VAL O 293
TYR O 302
ARG O 306
GLN O 384
ASC O1004
6D8A_F_ACTF803 6d8a ACT

DB03166
(Acetic
acid)
Rhodobacter
sphaeroides
UNCHARACTERIZED
PROTEIN
None 4 MET F 528
TYR F 571
ARG F 606
LEU F 608
ACT F 803
6D8F_A_ACTA803 6d8f ACT

DB03166
(Acetic
acid)
Rhodobacter
sphaeroides
UNCHARACTERIZED
PROTEIN
PF02171
(Piwi)
3 GLU A 377
LEU A 380
ARG A 384
ACT A 803
6D8P_A_ACTA810 6d8p ACT

DB03166
(Acetic
acid)
Rhodobacter
sphaeroides
UNCHARACTERIZED
PROTEIN
PF02171
(Piwi)
6 HIS A 516
TYR A 557
TYR A 717
GLU A 720
GLN A 721
LYS A 724
ACT A 810
6D8P_A_ACTA814 6d8p ACT

DB03166
(Acetic
acid)
Rhodobacter
sphaeroides
UNCHARACTERIZED
PROTEIN
PF02171
(Piwi)
5 TYR A 494
GLN A 497
ASN A 498
THR A 733
LEU A 734
ACT A 814
6D8P_A_ACTA816 6d8p ACT

DB03166
(Acetic
acid)
Rhodobacter
sphaeroides
UNCHARACTERIZED
PROTEIN
PF02171
(Piwi)
3 ARG A 322
ARG A 681
ASP A 716
ACT A 816
6D8P_B_ACTB803 6d8p ACT

DB03166
(Acetic
acid)
Rhodobacter
sphaeroides
UNCHARACTERIZED
PROTEIN
None 4 MET B 528
TYR B 571
ARG B 606
LEU B 608
ACT B 803
6D8P_B_ACTB804 6d8p ACT

DB03166
(Acetic
acid)
Rhodobacter
sphaeroides
UNCHARACTERIZED
PROTEIN
None 4 HIS B 639
VAL B 685
LEU B 702
ALA B 737
ACT B 804
6D9K_F_ACTF802 6d9k ACT

DB03166
(Acetic
acid)
Rhodobacter
sphaeroides
UNCHARACTERIZED
PROTEIN
None 3 TYR F 571
ALA F 604
LEU F 608
ACT F 802